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Feasibility of Rapid Automated Liver Quantitative Susceptibility Mapping in a Patient Population
Ramin Jafari1, Sujit Sheth2, Pascal Spincemaille2, Thanh D. Nguyen2, Martin R. Prince2, Yan Wen1, Yihao Guo3, Kofi Deh2, Zhe Liu1, Daniel Margolis2, Gary M. Brittenham4, Andrea S. Kierans2, and Yi Wang1

1Cornell University, New York, NY, United States, 2Weill Cornell Medicine, New York, NY, United States, 3Southern Medical University, Guangzhou, China, 4Columbia University Medical Center, New York, NY, United States

Synopsis

Accurate measurement of the liver iron concentration (LIC) is needed to guide iron-chelating therapy for patients with transfusional iron overload. In this work, we investigate the feasibility of automated quantitative susceptibility mapping (QSM) to measure the LIC in clinical practice. We propose to incorporate In-phase echo acquisition for rapid, robust initialization of the field in water-fat separation problem (T2*-IDEAL).

Introduction

Quantitative Susceptibility Mapping (QSM) is an emerging noninvasive MRI method to quantify iron, calcium and other susceptibility sources (1,2). In patients with transfusional iron overload, QSM enables accurate noninvasive monitoring of liver iron to guide iron-chelating therapy (3). A major challenge in liver QSM is to solve the nonlinear water-fat separation, R2* and field estimation problem (4,5). This nonlinear optimization is highly dependent on the initial guess and can converge to local minima. We propose to use in-phase (IP) echoes for rapid initialization of the field and R2*(6). This method was compared with a 3D graph cuts field initialization method (SPURS) (7) to (i) assess reproducibility of liver QSM in healthy subjects for two field strengths, two manufacturers, and (ii) evaluate its feasibility within clinical practice.

Methods

The T2*-IDEAL problem estimates fat content $$$(F)$$$, water content $$$(W)$$$, susceptibility induced field $$$(f)$$$ and $$$R_2^*$$$ decay by modeling the complex gradient-recalled echo (GRE) signal $$$S$$$ shown in Eq. 1. We propose 1) using out-of-phase echo spacing (∆TE= 2.3 msec at 1.5T and 1.15 msec at 3T) , and 2) obtain initial guesses $$$f_{IP}$$$ and $$$R_{2,IP}^*$$$ for Eq.1 using the echoes that are in-phase with respect to the first echo, i.e., the odd echoes, by solving Eqs. 2 & 3.

$$(W,F,f,R_2^* )=argmin\sum_{j=1}^N||S(t_j )-e^{-R_2^* t_j } e^{-i2πft_j} (W+Fe^{-i2πν_F t_j })||_2^2, [1]$$

$$f_{IP} =argmin\sum_{j_{odd}}||S(t_j )-|S(t_j )|e^{-i2πf_{IP} t_j })||_2^2, [2]$$

$$(a,{R_2^*}_{IP})=argmin\sum_{j_{odd}}|||S(t_j )|-a.e^{{R_2^*}_{IP} t_j })||_2^2, [3]$$

QSM is reconstructed in a Bayesian setting (2),

$$χ=argmin\frac{1}{2}||w(e^{-if}-e^{-i(d*χ)})||_2^2+λ_1||M_G\triangledown χ||_1+λ_2||M_{aorta}(χ-\overline{χ}_{aorta})||^2_2, [4]$$

assuming Gaussian noise (8), $$$χ$$$ is susceptibility, $$$w$$$ noise weighting, $$$f$$$ the local field, $$$d$$$ the dipole kernel, $$$M_G$$$ the binary edge mask, , $$$λ_1, λ_2$$$ regularization parameters, and $$$M_{aorta}$$$ the binary mask of abdominal aorta used for zero-referencing (9).

Reproducibility of liver QSM was studied in n=8 healthy subjects using a breath-hold multi-echo 3D gradient echo (GRE) sequence across 4 scanners including two 1.5T GE scanners (S1, S2), one 1.5T (S3) and one 3T (S4) Siemens scanner. Clinical feasibility was assessed in n=19 patients at scanners S1 and S2.

For reproducibility tests, an axial slice depicting approximately the same part of the liver was used for ROI analysis, using a large hepatic vein on R2* as a landmark. ROIs were drawn on the liver avoiding vessels and inhomogeneous regions. R2*, and susceptibility values in the liver were calculated comparing both IP and SPURS methods. Regression analysis (coefficient of determination and slope) and Bland-Altman analysis (bias and 95% limits of agreement LoA) was performed for each scanner pair.

An experienced radiologist (25 years of experience) read all images. Measurements of initialization execution time, PDFF, R2*, and susceptibility on ROI of a homogenous region of liver avoiding vessels are reported for both IP and SPURS methods. For statistical analysis paired t-test and linear regression were performed.

Results

In Figure 1, PDFF, R2*, and susceptibility maps of the same liver structure in a healthy subject scanned at four scanners shows similar intensity and variation across 4 scanners except for R2* maps at S4 which is a 3T scanner. Table 1 shows good agreement between scanner pairs and both initialization methods.

Figure 2 shows the magnitude, PDFF, R2*, and QSM maps in 4 thalassemia major patients. Subjects had iron levels from low (Fig.2a) to high (Fig.2d). Water-fat separation was successful with low fat for these livers (PDFF in the second row). The R2* increased from 34 Hz to 240 Hz (third row), suggesting normal or low to moderate iron overload in these patients. QSM values ranged from 0.13 ppm to 0.4 ppm (last row). ROI analysis in all 19 patients in Table 2 and IP method showed PDFF range from 1% to 8.6%, R2* range from 25 Hz to 388 Hz, and susceptibility from 0.04 ppm to 0.57 ppm.

Conclusion

Our data demonstrate that automated liver QSM is feasible and reproducible across different manufacturers and models of scanners at both 1.5T and 3T. The in-phase echoes (IP) initialization of the T2*-IDEAL problem provides approximately a 5.7-fold improvement in speed compared to the current SPURS initialization with no loss of quality. Data acquisition can be performed within a breath-hold using a 3D multi-echo gradient echo sequence. We demonstrate feasibility of liver QSM in patients with iron overload in clinical practice.

Acknowledgements

No acknowledgement found.

References

1. Sharma SD, Hernando D, Horng DE, Reeder SB. Quantitative susceptibility mapping in the abdomen as an imaging biomarker of hepatic iron overload. Magn Reson Med 2015;74(3):673-683.

2. de Rochefort L, Liu T, Kressler B, et al. Quantitative susceptibility map reconstruction from MR phase data using bayesian regularization: validation and application to brain imaging. Magnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine 2010;63(1):194-206.

3. Brittenham GM. Iron-chelating therapy for transfusional iron overload. N Engl J Med 2011;364(2):146-156.

4. Yu H, McKenzie CA, Shimakawa A, et al. Multiecho reconstruction for simultaneous water-fat decomposition and T2* estimation. J Magn Reson Imaging 2007;26(4):1153-1161.

5. Reeder SB, McKenzie CA, Pineda AR, et al. Water-fat separation with IDEAL gradient-echo imaging. J Magn Reson Imaging 2007;25(3):644-652.

6. Zhong X, Nickel MD, Kannengiesser SA, Dale BM, Kiefer B, Bashir MR. Liver fat quantification using a multi-step adaptive fitting approach with multi-echo GRE imaging. Magn Reson Med 2014;72(5):1353-1365.

7. Dong J, Liu T, Chen F, et al. Simultaneous phase unwrapping and removal of chemical shift (SPURS) using graph cuts: application in quantitative susceptibility mapping. IEEE Trans Med Imaging 2015;34(2):531-540.

8. Liu T, Wisnieff C, Lou M, Chen W, Spincemaille P, Wang Y. Nonlinear formulation of the magnetic field to source relationship for robust quantitative susceptibility mapping. Magnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine 2013;69(2):467-476.

9. Liu Z, Spincemaille P, Yao Y, Zhang Y, Wang Y. MEDI+0: Morphology enabled dipole inversion with automatic uniform cerebrospinal fluid zero reference for quantitative susceptibility mapping. Magnetic resonance in medicine : official journal of the Society of Magnetic Resonance in Medicine / Society of Magnetic Resonance in Medicine 2018;79(5):2795-2803.

Figures

Table 1. Linear regression coefficient of determination ( $$$r^2$$$), slope (k ) and Bland-Altman analysis bias (b), 95% limits of agreement (LOA) for each scanner pair comparing IP and SPURS methods for calculating QSM and R2* in 8 healthy subjects. Scanners S1, S2, and S3 are 1.5T and S4 is 3T.

Table 2. Initialization execution time, proton density fat fraction (PDFF), R2*, and susceptibility ROI analysis with the corresponding p-value for paired t-test and coefficient of determination ( $$$r^2$$$), slope ( k) for linear regression, in 19 patients comparing the proposed IP method vs the existing SPURS method.

Figure 1. Magnitude, PDFF (%), R2* (Hz), and QSM (ppm) in a healthy subject across 4 scanners including S1 (1.5T), S2 (1.5T), S3 (1.5T), S4 (3T).

Figure 2. Magnitude, PDFF (%), R2* (Hz), and QSM (ppm) in 4 thalassemia major patients (a-d). Liver iron increase (from left to right) is observable in both R2* (Hz) and susceptibility (ppm) maps.

Proc. Intl. Soc. Mag. Reson. Med. 27 (2019)
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