Benjamin Leporq1, Camille Schreiner2, Agnes Coulon2, Olivier Beuf1, and Frank Pilleul2
1CREATIS CNRS UMR 5220; Inserm U1206; INSA-Lyon; UCBL Lyon 1, Université de Lyon, Villeurbanne, France, 2Department of Radiology, Centre de lutte contre le cancer Léon Berard, Lyon, France
Synopsis
In
this study a multiparametric MRI-based radiomic method to predict cancer in MRI
BI-RADS 4 breast lesions, in high-risk oncogenetic patients is proposed. The
results demonstrated that mpMRI-based radiomic can
predict all malignant lesions among MRI BI-RADS 4 lesion and reduced the number
of unnecessary biopsy by 86% in our population.
Introduction
Breast cancer is one of the major health
concerns, and the most common
malignancy worldwide for women with an incidence estimated around 2.1 million
in 2018(1) and the second
leading cause of cancer death, for women (2). Up to 20% of breast cancer occurs
in women with a genetic predisposition linked to BRCA1-2 gene mutations (3,4).
In this high-risk oncogenetic population, a screening program has been
developed, recommending MRI as a supplemental diagnostic tool in many countries
(5-7). While MRI have a good sensitivity for breast cancer detection in
screening context (estimated at 90%) (4,8-11) it suffer from a lack of specificity
with a positive predictive values for MRI BI-RADS 4 lesions reported around 20%
(12), many biopsies done for benign lesions could be avoided. Therefore, more specific and objective methods to guide the
decision for biopsy in this population are needed.
The
purpose of this study is to develop and assess a multiparametric MRI
(mpMRI)-based radiomic method to predict cancer in MRI BI-RADS 4 breast
lesions, in high-risk oncogenetic patients. Methods
49 MRI BI-RADS 4 lesions
from 44 high-risk oncogenetic patients with histology and 1.5T multiparametric
MRI data available were retrospectively enrolled. Fat-suppressed
perfusion-weighted images at 3 min and subtraction; diffusion-weighted images
(b = 0 and b = 700 s.mm-2) and ADC maps were used as radiomic
fingerprints. The lesions were manually segmented by two independent
radiologists to extract the radiome and to study the inter-observer
reproducibility. The radiome included 87 features describing shape, size,
distribution and texture in for each radiomic fingerprint in images and frequency
domain (Fig.1). Overall, 435 features were integrated. The learning base
dimension was reduced to decrease the risk of overfitting and create another
set of relevant features in term of relevancy and inter-observer
reproducibility criterion. This procedure was achieved using a backward selection
by a double thresholding on t-test p-value (t < 0.2) and Pearson’s
correlation coefficient (t > 0.8),
computed from the reproducibility study. The implementation of classification
model was performed with a support vector machine as a classifier with a linear
kernel. Before training, data were centered at their mean and scales to have
unit standard deviation. Support vector computation and hyperplane separation
was done using a sequential minimal optimization. Internal validation was
performed with a holdout cross-validation method (75 % of data were used for
training and 25 % for test).Results
Among the 435 radiomic features,
Pearson’s correlation coefficient ranged between 0.18 and 0.99; mean: 0.80 ±
0.14. Determination and Spearman rho coefficients ranged between 0.03 and 0.99;
mean: 0.66 ± 0.21 and between 0.39 and 0.99; mean: 0.22 ± 0.12 respectively.
The parts of reproducible features stratified by feature family and radiomic
fingerprint were summarized in Fig.2 and Fig.3.
Based on t-test p-value, the radiome
extracted from the DWI images at b = 700 s.mm-2
was the most relevant with 36.8% (32/87) of features considered relevant. The radiome
extracted from the subtracted dynamic images was the less relevant with only
5.8% (5/87) features considered relevant. The parts of relevant features
stratified by feature family and radiomic fingerprint were summarized in Fig.2
and Fig.3.
After combination with
reproducibility criterion, 8.3% of features (36/435) were integrated in the
learning step. The diagnosis performances to predict malignant lesions were:
AUROC 0.94; sensitivity, 100% (95% CI: 100 – 100%); specificity, 85.6% (95% CI:
59.8 – 111%); PPV, 87.5% (95% CI: 64.6 – 110%); NPV, 100% (95% CI: 100 – 100%)
and accuracy 92.9% (95% CI: 79.4 – 106%).Discussion
In this study, all cancers have been detected
and 18 (85.6%) biopsies could be avoided. This is a central issue in these
young, anxious and asymptomatic women to improve adhesion to the screening program
reduce morbidity, psychologic impact and healthcare cost. To conclude, mpMRI-based radiomic could be helpful to non-invasively
predict cancer among MRI BI-RADS 4 lesion in high-risk patients. These
results need to be confirmed in a validation cohort from multicentric data.Acknowledgements
This work was performed within the framework of
the SIRIC LyriCAN grant INCa_INSERM_DGOS_12563 and LABEX PRIMES
(ANR-11-LABX-0063), program "Investissements d'Avenir"
(ANR-11-IDEX-0007).References
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